Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16300 | Not Available | Negative | 407627 - 407992 | 12321.3 |
| hu family dna-binding protein | A6122_RS01840 | Not Available | Positive | 408255 - 408542 | 9791.61 |
| cytochrome c oxidase assembly protein | A6122_RS01845 | Not Available | Positive | 408635 - 410728 | 73892.3 |
| atp-dependent recd-like dna helicase | A6122_RS01850 | Not Available | Positive | 410779 - 412080 | 48166.4 |
| heme oxygenase (biliverdin-producing) | A6122_RS01855 | Not Available | Negative | 412105 - 412752 | 23776.0 |
| hypothetical protein | A6122_RS01860 | Not Available | Negative | 412860 - 413348 | 15797.5 |
| duf4383 domain-containing protein | A6122_RS01865 | Not Available | Negative | 413508 - 413924 | 14061.6 |
| serine hydrolase | A6122_RS01870 | Not Available | Positive | 414185 - 415429 | 41945.3 |
| dinb family protein | A6122_RS01875 | Not Available | Positive | 415455 - 415973 | 19638.5 |
| dienelactone hydrolase family protein | A6122_RS01880 | Not Available | Negative | 415977 - 416627 | 22960.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
