Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS01740 | Not Available | Positive | 391195 - 391596 | 13981.8 |
| res domain-containing protein | A6122_RS01745 | Not Available | Positive | 391600 - 392175 | 21997.8 |
| hypothetical protein | A6122_RS16295 | Not Available | Positive | 392312 - 392449 | 4535.69 |
| duf6458 family protein | A6122_RS01750 | Not Available | Negative | 392523 - 392780 | 8723.86 |
| ppox class f420-dependent oxidoreductase | A6122_RS01755 | Not Available | Negative | 392921 - 393319 | 14877.0 |
| endonuclease/exonuclease/phosphatase family protein | A6122_RS01760 | Not Available | Positive | 393395 - 394225 | 30684.2 |
| hypothetical protein | A6122_RS01765 | Not Available | Positive | 394222 - 394851 | 21638.2 |
| sos response-associated peptidase | A6122_RS01770 | Not Available | Positive | 394861 - 395565 | 25854.2 |
| hypothetical protein | A6122_RS01775 | Not Available | Negative | 395639 - 396043 | 14367.6 |
| alpha/beta hydrolase | A6122_RS01780 | Not Available | Positive | 396081 - 397403 | 45746.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
