Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS01640 | Not Available | Positive | 371229 - 372131 | 32143.2 |
| hypothetical protein | A6122_RS01645 | Not Available | Positive | 372327 - 373256 | 34075.4 |
| transposase family protein | A6122_RS01650 | Not Available | Positive | 373493 - 374248 | 28640.2 |
| hypothetical protein | A6122_RS01655 | Not Available | Negative | 374666 - 376168 | 51042.6 |
| hypothetical protein | A6122_RS01660 | Not Available | Positive | 376425 - 377333 | 32897.0 |
| duf2945 domain-containing protein | A6122_RS01665 | Not Available | Negative | 377363 - 377560 | 7442.54 |
| hypothetical protein | A6122_RS01670 | Not Available | Negative | 377557 - 378225 | 23616.7 |
| glycogen debranching protein glgx | A6122_RS01675 | Not Available | Negative | 378225 - 380270 | 74768.0 |
| nadp-dependent oxidoreductase | A6122_RS01680 | Not Available | Negative | 380395 - 381357 | 32799.6 |
| hypothetical protein | A6122_RS01685 | Not Available | Positive | 381477 - 381854 | 12734.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
