Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | A6122_RS01540 | Not Available | Negative | 351645 - 353177 | 53589.3 |
| alpha/beta fold hydrolase | A6122_RS01545 | Not Available | Negative | 353174 - 354514 | 47292.8 |
| lyse/argo family amino acid transporter | A6122_RS01550 | Not Available | Negative | 354708 - 355346 | 21891.4 |
| polysaccharide deacetylase family protein | A6122_RS01555 | Not Available | Negative | 355524 - 356318 | 28191.2 |
| 50s ribosomal protein l28 | A6122_RS01560 | Not Available | Positive | 356622 - 356858 | 8599.64 |
| 50s ribosomal protein l33 | A6122_RS01565 | Not Available | Positive | 356858 - 357025 | 6587.99 |
| 30s ribosomal protein s14 | A6122_RS01570 | Not Available | Positive | 357028 - 357333 | 11380.8 |
| deoxyribose-phosphate aldolase | A6122_RS01575 | Not Available | Positive | 357408 - 358133 | 24899.4 |
| hypothetical protein | A6122_RS01580 | Not Available | Positive | 358195 - 358725 | 18049.5 |
| hypothetical protein | A6122_RS01585 | Not Available | Negative | 358959 - 359234 | 9847.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
