Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | A6122_RS14520 | Not Available | Positive | 3181507 - 3182508 | 36365.5 |
| sugar abc transporter atp-binding protein | A6122_RS14525 | Not Available | Positive | 3182662 - 3184179 | 55158.2 |
| thiamine pyrophosphate-binding protein | A6122_RS14530 | Not Available | Positive | 3184349 - 3185995 | 56738.2 |
| hypothetical protein | A6122_RS14535 | Not Available | Positive | 3186100 - 3186804 | 24767.0 |
| abc transporter substrate-binding protein | A6122_RS14540 | Not Available | Positive | 3187043 - 3188044 | 34889.2 |
| sugar abc transporter atp-binding protein | A6122_RS14545 | Not Available | Positive | 3188190 - 3189764 | 56367.8 |
| abc transporter permease | A6122_RS14550 | Not Available | Positive | 3189761 - 3190837 | 36344.5 |
| abc transporter permease subunit | A6122_RS14555 | Not Available | Positive | 3190834 - 3191874 | 35915.2 |
| family 43 glycosylhydrolase | A6122_RS14560 | Not Available | Positive | 3192463 - 3197034 | 157757.0 |
| hypothetical protein | A6122_RS14565 | Not Available | Positive | 3197109 - 3197732 | 20769.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
