Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | A6122_RS01400 | Not Available | Positive | 320303 - 321430 | 40887.4 |
| alpha-ketoacid dehydrogenase subunit beta | A6122_RS01405 | Not Available | Positive | 321430 - 322458 | 36927.4 |
| dihydrolipoamide acetyltransferase family protein | A6122_RS01410 | Not Available | Positive | 322502 - 323839 | 46619.9 |
| alpha-n-arabinofuranosidase | A6122_RS01415 | Not Available | Negative | 324096 - 325631 | 55657.3 |
| laci family dna-binding transcriptional regulator | A6122_RS01420 | Not Available | Negative | 325936 - 326931 | 35220.9 |
| metal abc transporter solute-binding protein, zn/mn family | A6122_RS01425 | Not Available | Positive | 327080 - 328024 | 32356.5 |
| metal abc transporter atp-binding protein | A6122_RS01430 | Not Available | Positive | 328054 - 328884 | 29718.8 |
| metal abc transporter permease | A6122_RS01435 | Not Available | Positive | 328884 - 329747 | 29073.8 |
| fur family transcriptional regulator | A6122_RS01440 | Not Available | Positive | 329782 - 330183 | 14257.7 |
| asparaginase domain-containing protein | A6122_RS01445 | Not Available | Negative | 330222 - 330707 | 17018.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
