Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminodeoxychorismate/anthranilate synthase component ii | A6122_RS00100 | Not Available | Positive | 18005 - 18652 | 22908.4 |
| helix-turn-helix domain-containing protein | A6122_RS00105 | Not Available | Positive | 19110 - 19961 | 30407.2 |
| stk1 family pasta domain-containing ser/thr kinase | A6122_RS00110 | Not Available | Negative | 20075 - 21778 | 60086.1 |
| protein kinase domain-containing protein | A6122_RS00115 | Not Available | Negative | 21877 - 23637 | 60219.1 |
| penicillin-binding protein 2 | A6122_RS00120 | Not Available | Negative | 23634 - 25088 | 50313.1 |
| ftsw/roda/spove family cell cycle protein | A6122_RS00125 | Not Available | Negative | 25096 - 26478 | 48667.7 |
| stp1/irep family pp2c-type ser/thr phosphatase | A6122_RS00130 | Not Available | Negative | 26475 - 27767 | 46434.5 |
| fha domain-containing protein | A6122_RS00135 | Not Available | Negative | 27771 - 28358 | 20977.1 |
| duf3662 and fha domain-containing protein | A6122_RS00140 | Not Available | Negative | 28355 - 29098 | 26547.5 |
| Trna-leu | Not Available | Not Available | Positive | 29452 - 29538 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
