Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | A6122_RS14360 | Not Available | Negative | 3148458 - 3149723 | 43642.8 |
| hypothetical protein | A6122_RS14365 | Not Available | Negative | 3149796 - 3149963 | 5779.86 |
| nad(p)/fad-dependent oxidoreductase | A6122_RS14370 | Not Available | Positive | 3150164 - 3151420 | 45301.1 |
| hypothetical protein | A6122_RS17435 | Not Available | Negative | 3151510 - 3152127 | 21247.0 |
| alcohol dehydrogenase catalytic domain-containing protein | A6122_RS17440 | Not Available | Negative | 3152124 - 3152624 | 17813.5 |
| tetr/acrr family transcriptional regulator | A6122_RS14380 | Not Available | Positive | 3152709 - 3153275 | 20565.8 |
| hydroxymethylglutaryl-coa lyase | A6122_RS14385 | Not Available | Negative | 3153362 - 3154288 | 31755.7 |
| caib/baif coa-transferase family protein | A6122_RS14390 | Not Available | Negative | 3154285 - 3155520 | 43557.9 |
| glutathionylspermidine synthase family protein | A6122_RS14395 | Not Available | Positive | 3155613 - 3156992 | 50955.5 |
| hypothetical protein | A6122_RS14400 | Not Available | Positive | 3156989 - 3157786 | 26269.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
