Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | A6122_RS14215 | Not Available | Negative | 3120177 - 3120983 | 28252.7 |
| d-2-hydroxyacid dehydrogenase | A6122_RS14220 | Not Available | Negative | 3121007 - 3122056 | 37235.6 |
| nad(p)-dependent oxidoreductase | A6122_RS14225 | Not Available | Positive | 3122155 - 3123042 | 29848.9 |
| voc family protein | A6122_RS14230 | Not Available | Positive | 3123187 - 3123543 | 12783.7 |
| smp-30/gluconolactonase/lre family protein | A6122_RS14235 | Not Available | Negative | 3123584 - 3124501 | 33050.6 |
| sugar-binding transcriptional regulator | A6122_RS14240 | Not Available | Positive | 3124609 - 3125580 | 34322.5 |
| gntp family permease | A6122_RS14245 | Not Available | Negative | 3125736 - 3127178 | 48496.1 |
| voc family protein | A6122_RS14250 | Not Available | Positive | 3127383 - 3127901 | 19165.0 |
| molybdate abc transporter substrate-binding protein | A6122_RS14255 | Not Available | Positive | 3128013 - 3128738 | 23064.8 |
| molybdopterin-binding protein | A6122_RS14260 | Not Available | Positive | 3128878 - 3129282 | 14151.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
