Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16795 | Not Available | Positive | 3101009 - 3101626 | 22856.9 |
| hypothetical protein | A6122_RS16800 | Not Available | Negative | 3101630 - 3102400 | 26664.9 |
| hypothetical protein | A6122_RS14135 | Not Available | Positive | 3102765 - 3103016 | 8976.07 |
| hypothetical protein | A6122_RS16805 | Not Available | Positive | 3103431 - 3103673 | 9006.46 |
| transposase family protein | A6122_RS16145 | Not Available | Positive | 3103758 - 3104528 | 28656.5 |
| potassium channel family protein | A6122_RS17415 | Not Available | Positive | 3104976 - 3105257 | 9929.85 |
| hypothetical protein | A6122_RS14150 | Not Available | Negative | 3105247 - 3105786 | 17314.1 |
| hypothetical protein | A6122_RS14155 | Not Available | Negative | 3105818 - 3106039 | 7560.33 |
| transposase family protein | A6122_RS16150 | Not Available | Negative | 3106287 - 3107057 | 28655.6 |
| gfo/idh/moca family protein | A6122_RS14160 | Not Available | Positive | 3107494 - 3108666 | 41910.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
