Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | A6122_RS17045 | Not Available | Positive | 3083419 - 3084114 | 26274.2 |
| transposase family protein | A6122_RS14035 | Not Available | Negative | 3084118 - 3084726 | 22333.6 |
| hypothetical protein | A6122_RS14040 | Not Available | Positive | 3084970 - 3085269 | 11222.4 |
| is256 family transposase | A6122_RS14045 | Not Available | Negative | 3085784 - 3087145 | 50192.2 |
| hypothetical protein | A6122_RS14050 | Not Available | Positive | 3087693 - 3087890 | 7423.81 |
| hypothetical protein | A6122_RS14055 | Not Available | Positive | 3087908 - 3088354 | 16161.4 |
| hypothetical protein | A6122_RS16780 | Not Available | Positive | 3088535 - 3089311 | 28608.4 |
| hypothetical protein | A6122_RS14065 | Not Available | Positive | 3089327 - 3090079 | 27533.5 |
| hypothetical protein | A6122_RS14070 | Not Available | Positive | 3090076 - 3090528 | 16458.8 |
| hypothetical protein | A6122_RS14075 | Not Available | Negative | 3090539 - 3090814 | 10446.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
