Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | A6122_RS14000 | Not Available | Negative | 3073503 - 3075344 | 65134.9 |
| nadph:quinone reductase | A6122_RS14005 | Not Available | Positive | 3075503 - 3076516 | 35274.4 |
| nad-dependent epimerase/dehydratase family protein | A6122_RS14010 | Not Available | Negative | 3076583 - 3077599 | 36394.6 |
| transposase family protein | A6122_RS17155 | Not Available | Negative | 3078020 - 3078268 | 9671.52 |
| is3 family transposase | A6122_RS14015 | Not Available | Negative | 3078241 - 3079424 | 45213.6 |
| transposase family protein | A6122_RS16120 | Not Available | Negative | 3079457 - 3080089 | 23091.9 |
| transposase family protein | A6122_RS14020 | Not Available | Positive | 3080674 - 3080916 | 9265.18 |
| transposase family protein | A6122_RS16125 | Not Available | Positive | 3080956 - 3081429 | 18001.4 |
| transposase family protein | A6122_RS16135 | Not Available | Positive | 3082310 - 3083053 | 27405.9 |
| transposase | A6122_RS16140 | Not Available | Positive | 3083072 - 3083362 | 10981.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
