Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | A6122_RS01350 | Not Available | Positive | 311079 - 311699 | 22614.3 |
| glycosyltransferase family 4 protein | A6122_RS01355 | Not Available | Positive | 311794 - 313926 | 77412.1 |
| duf308 domain-containing protein | A6122_RS01360 | Not Available | Positive | 314087 - 314680 | 19821.5 |
| hypothetical protein | A6122_RS17190 | Not Available | Positive | 314677 - 314991 | 11135.3 |
| hypothetical protein | A6122_RS01370 | Not Available | Negative | 315130 - 315492 | 13796.4 |
| adenylosuccinate lyase | A6122_RS01375 | Not Available | Negative | 315586 - 316968 | 50406.7 |
| low molecular weight protein-tyrosine-phosphatase | A6122_RS01380 | Not Available | Negative | 316989 - 317555 | 20514.0 |
| phage holin family protein | A6122_RS01385 | Not Available | Negative | 317679 - 318077 | 14246.2 |
| hypothetical protein | A6122_RS17085 | Not Available | Negative | 318121 - 319008 | 29140.6 |
| histidinol-phosphate transaminase | A6122_RS01395 | Not Available | Positive | 319192 - 320298 | 39618.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
