Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc-dependent alcohol dehydrogenase | A6122_RS13950 | Not Available | Positive | 3066589 - 3067764 | 42233.8 |
| csbd family protein | A6122_RS13955 | Not Available | Negative | 3067825 - 3067995 | 5942.9 |
| hypothetical protein | A6122_RS13960 | Not Available | Negative | 3068142 - 3068342 | 6217.09 |
| manganese catalase family protein | A6122_RS13965 | Not Available | Negative | 3068339 - 3069223 | 31876.5 |
| hypothetical protein | A6122_RS13970 | Not Available | Positive | 3069506 - 3070327 | 27799.4 |
| phage holin family protein | A6122_RS13975 | Not Available | Positive | 3070324 - 3070758 | 14898.1 |
| duf3618 domain-containing protein | A6122_RS13980 | Not Available | Positive | 3070755 - 3071342 | 20072.2 |
| hypothetical protein | A6122_RS13985 | Not Available | Negative | 3071448 - 3072086 | 23709.5 |
| hypothetical protein | A6122_RS13990 | Not Available | Negative | 3072125 - 3072763 | 23880.8 |
| hypothetical protein | A6122_RS13995 | Not Available | Negative | 3072802 - 3073467 | 24664.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
