Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine synthase subunit purq | A6122_RS13850 | Not Available | Positive | 3042512 - 3043210 | 24456.0 |
| hypothetical protein | A6122_RS13855 | Not Available | Negative | 3043236 - 3043487 | 8793.48 |
| glycoside hydrolase family 65 protein | A6122_RS13860 | Not Available | Negative | 3043639 - 3046143 | 93298.4 |
| had family phosphatase | A6122_RS13865 | Not Available | Negative | 3046140 - 3046898 | 26356.1 |
| duf1697 domain-containing protein | A6122_RS13870 | Not Available | Negative | 3047203 - 3047730 | 18623.1 |
| duf2254 family protein | A6122_RS13875 | Not Available | Positive | 3047754 - 3048497 | 26453.8 |
| gnat family n-acetyltransferase | A6122_RS13880 | Not Available | Positive | 3048661 - 3049938 | 45398.5 |
| marp family serine protease | A6122_RS13885 | Not Available | Positive | 3050177 - 3051358 | 38563.5 |
| glycosyltransferase family 39 protein | A6122_RS13890 | Not Available | Negative | 3051363 - 3052835 | 51454.7 |
| phosphoribosylformylglycinamidine synthase subunit purl | A6122_RS13895 | Not Available | Positive | 3052866 - 3055160 | 81147.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
