Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| had-iia family hydrolase | A6122_RS13795 | Not Available | Negative | 3029315 - 3030316 | 34709.1 |
| hypothetical protein | A6122_RS13800 | Not Available | Negative | 3030300 - 3031058 | 27780.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3031758 - 3031874 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3032059 - 3035175 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3035776 - 3037298 | Not Available |
| catalase | A6122_RS13820 | Not Available | Negative | 3038074 - 3039573 | 55431.2 |
| fur family transcriptional regulator | A6122_RS13825 | Not Available | Negative | 3039631 - 3040050 | 14892.7 |
| s1c family serine protease | A6122_RS13830 | Not Available | Negative | 3040169 - 3041470 | 42109.9 |
| glutamate-cysteine ligase family protein | A6122_RS16110 | Not Available | Positive | 3041672 - 3042177 | 18001.8 |
| phosphoribosylformylglycinamidine synthase subunit purs | A6122_RS13845 | Not Available | Positive | 3042258 - 3042515 | 9103.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
