Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-cysteine ligase family protein | A6122_RS13695 | Not Available | Negative | 3010602 - 3011495 | 32408.7 |
| atp-dependent dna ligase | A6122_RS13700 | Not Available | Positive | 3011730 - 3014225 | 90000.4 |
| mfs transporter | A6122_RS13705 | Not Available | Negative | 3014330 - 3015490 | 37948.0 |
| hypothetical protein | A6122_RS13710 | Not Available | Negative | 3015571 - 3015870 | 10909.2 |
| hypothetical protein | A6122_RS13715 | Not Available | Negative | 3016044 - 3016382 | 11901.8 |
| atp-dependent dna ligase | A6122_RS13720 | Not Available | Positive | 3016568 - 3016900 | 12423.9 |
| hypothetical protein | A6122_RS13725 | Not Available | Positive | 3016897 - 3017127 | 8199.57 |
| hypothetical protein | A6122_RS13730 | Not Available | Positive | 3017295 - 3017585 | 10555.0 |
| gaf and antar domain-containing protein | A6122_RS13735 | Not Available | Positive | 3017582 - 3018235 | 23103.2 |
| gaf and antar domain-containing protein | A6122_RS13740 | Not Available | Positive | 3018229 - 3018939 | 25737.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
