Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16760 | Not Available | Negative | 3003393 - 3003707 | 10779.4 |
| transposase family protein | A6122_RS13655 | Not Available | Negative | 3003769 - 3004524 | 28640.2 |
| nitroreductase family protein | A6122_RS13660 | Not Available | Positive | 3004865 - 3005668 | 30468.6 |
| hypothetical protein | A6122_RS13665 | Not Available | Positive | 3006008 - 3006325 | 11988.3 |
| hypothetical protein | A6122_RS13670 | Not Available | Positive | 3006435 - 3006803 | 13293.1 |
| thioredoxin domain-containing protein | A6122_RS13675 | Not Available | Positive | 3006867 - 3007592 | 25481.3 |
| cytochrome c biogenesis ccda family protein | A6122_RS13680 | Not Available | Positive | 3007596 - 3008396 | 26608.5 |
| glutathione peroxidase | A6122_RS13685 | Not Available | Negative | 3008404 - 3008883 | 17839.2 |
| hypothetical protein | A6122_RS16765 | Not Available | Negative | 3008988 - 3009242 | 9153.91 |
| is3 family transposase | A6122_RS13690 | Not Available | Positive | 3009365 - 3010548 | 45155.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
