Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS13600 | Not Available | Negative | 2992134 - 2992505 | 13475.2 |
| lysr family transcriptional regulator | A6122_RS13605 | Not Available | Negative | 2992552 - 2993454 | 32118.8 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | A6122_RS13610 | Not Available | Negative | 2993867 - 2996095 | 75598.4 |
| sterol carrier family protein | A6122_RS13615 | Not Available | Negative | 2996233 - 2996610 | 12864.4 |
| phosphoribosylamine--glycine ligase | A6122_RS13620 | Not Available | Positive | 2996765 - 2998033 | 44665.5 |
| epimerase | A6122_RS13625 | Not Available | Negative | 2998143 - 2999108 | 35222.0 |
| hypothetical protein | A6122_RS13630 | Not Available | Negative | 2999259 - 3000041 | 25882.9 |
| sdr family oxidoreductase | A6122_RS13635 | Not Available | Positive | 3000215 - 3001054 | 29289.4 |
| type iii polyketide synthase | A6122_RS13640 | Not Available | Positive | 3001107 - 3002222 | 39405.9 |
| methyltransferase domain-containing protein | A6122_RS13645 | Not Available | Positive | 3002219 - 3002929 | 26102.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
