Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS13555 | Not Available | Positive | 2984009 - 2984596 | 19733.7 |
| alpha/beta fold hydrolase | A6122_RS13560 | Not Available | Positive | 2984695 - 2985531 | 30214.3 |
| fad-dependent oxidoreductase | A6122_RS13565 | Not Available | Negative | 2985621 - 2986712 | 39758.7 |
| duf3073 domain-containing protein | A6122_RS13570 | Not Available | Positive | 2986878 - 2987075 | 7458.48 |
| hypothetical protein | A6122_RS13575 | Not Available | Positive | 2987173 - 2987391 | 7827.15 |
| arac family transcriptional regulator | A6122_RS13580 | Not Available | Positive | 2987455 - 2988411 | 34682.2 |
| phosphoribosylformylglycinamidine cyclo-ligase | A6122_RS13585 | Not Available | Negative | 2988509 - 2989618 | 37781.6 |
| gnat family n-acetyltransferase | A6122_RS13590 | Not Available | Positive | 2989751 - 2990287 | 19425.8 |
| amidophosphoribosyltransferase | A6122_RS13595 | Not Available | Positive | 2990358 - 2991815 | 53039.2 |
| hypothetical protein | A6122_RS16755 | Not Available | Positive | 2991936 - 2992076 | 5277.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
