Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide pyruvyl transferase family protein | A6122_RS01305 | Not Available | Positive | 297096 - 298343 | 44330.2 |
| glycosyltransferase | A6122_RS01310 | Not Available | Positive | 298340 - 299458 | 39688.0 |
| glycosyltransferase family 2 protein | A6122_RS01315 | Not Available | Positive | 299455 - 300429 | 35495.8 |
| acyltransferase family protein | A6122_RS01320 | Not Available | Positive | 300617 - 301777 | 43318.1 |
| alpha/beta hydrolase | A6122_RS01325 | Not Available | Positive | 301774 - 302670 | 31073.8 |
| wzz/fepe/etk n-terminal domain-containing protein | A6122_RS01330 | Not Available | Positive | 302795 - 304114 | 44498.6 |
| hypothetical protein | A6122_RS01335 | Not Available | Negative | 304641 - 305174 | 19041.8 |
| atp-binding cassette domain-containing protein | A6122_RS01340 | Not Available | Positive | 307108 - 307521 | 14976.8 |
| hypothetical protein | A6122_RS16275 | Not Available | Positive | 307581 - 307832 | 8737.26 |
| hypothetical protein | A6122_RS01345 | Not Available | Negative | 308358 - 310469 | 72773.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
