Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fibronectin type iii domain-containing protein | A6122_RS13455 | Not Available | Positive | 2961859 - 2963283 | 46308.6 |
| cell wall-binding repeat-containing protein | A6122_RS13460 | Not Available | Positive | 2963468 - 2965123 | 56801.6 |
| rok family protein | A6122_RS13465 | Not Available | Positive | 2965156 - 2966100 | 31398.5 |
| biopolymer transporter tol | A6122_RS13470 | Not Available | Negative | 2966522 - 2966830 | 11547.5 |
| hypothetical protein | A6122_RS13475 | Not Available | Negative | 2966823 - 2967653 | 29358.7 |
| glycosyltransferase | A6122_RS13480 | Not Available | Negative | 2967663 - 2968991 | 46379.9 |
| glycosyltransferase | A6122_RS13485 | Not Available | Negative | 2968988 - 2971123 | 73796.2 |
| php domain-containing protein | A6122_RS13490 | Not Available | Negative | 2971337 - 2972323 | 35866.5 |
| hypothetical protein | A6122_RS13495 | Not Available | Positive | 2972511 - 2973410 | 31207.6 |
| padr family transcriptional regulator | A6122_RS13500 | Not Available | Positive | 2973407 - 2974114 | 25199.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
