Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-cysteine ligase family protein | A6122_RS17600 | Not Available | Positive | 2939596 - 2939724 | 4864.43 |
| kynureninase | A6122_RS16735 | Not Available | Negative | 2939972 - 2941168 | 42589.9 |
| aldo/keto reductase | A6122_RS13365 | Not Available | Positive | 2941461 - 2942480 | 37337.3 |
| rbsd/fucu family protein | A6122_RS13375 | Not Available | Positive | 2942736 - 2943161 | 14834.0 |
| hemolysin family protein | A6122_RS13380 | Not Available | Positive | 2943311 - 2944642 | 47424.1 |
| smp-30/gluconolactonase/lre family protein | A6122_RS13385 | Not Available | Negative | 2944713 - 2945594 | 30663.9 |
| hypothetical protein | A6122_RS16740 | Not Available | Negative | 2945912 - 2946304 | 14700.6 |
| aaa family atpase | A6122_RS16090 | Not Available | Negative | 2946383 - 2947003 | 21711.7 |
| amino acid permease | A6122_RS13395 | Not Available | Negative | 2947810 - 2949720 | 68347.6 |
| hypothetical protein | A6122_RS13400 | Not Available | Negative | 2949896 - 2950255 | 13231.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
