Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | A6122_RS13095 | Not Available | Negative | 2884255 - 2886300 | 74379.5 |
| magnesium chelatase | A6122_RS13100 | Not Available | Negative | 2886293 - 2887666 | 49992.7 |
| abc transporter atp-binding protein | A6122_RS13105 | Not Available | Negative | 2887930 - 2889486 | 54126.4 |
| abc transporter permease | A6122_RS13110 | Not Available | Negative | 2889483 - 2890268 | 26360.9 |
| abc transporter permease | A6122_RS13115 | Not Available | Negative | 2890319 - 2891257 | 32450.6 |
| abc transporter substrate-binding protein | A6122_RS13120 | Not Available | Negative | 2891271 - 2892926 | 58210.4 |
| alpha/beta hydrolase fold domain-containing protein | A6122_RS13130 | Not Available | Negative | 2893574 - 2894464 | 31638.2 |
| glsb/yeaq/ymge family stress response membrane protein | A6122_RS13135 | Not Available | Negative | 2894520 - 2894798 | 9583.37 |
| response regulator transcription factor | A6122_RS13140 | Not Available | Positive | 2894946 - 2895608 | 24261.6 |
| alpha/beta hydrolase | A6122_RS13145 | Not Available | Negative | 2895605 - 2896384 | 26959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
