Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | A6122_RS13045 | Not Available | Positive | 2871706 - 2872629 | 31913.4 |
| malate dehydrogenase | A6122_RS13050 | Not Available | Positive | 2872626 - 2873609 | 34187.1 |
| acyl-coa dehydrogenase | A6122_RS13055 | Not Available | Negative | 2873686 - 2875830 | 77075.1 |
| dna helicase recq | A6122_RS13060 | Not Available | Negative | 2876603 - 2878609 | 72423.7 |
| 2'-5' rna ligase family protein | A6122_RS13065 | Not Available | Negative | 2878856 - 2879341 | 17000.4 |
| hypothetical protein | A6122_RS13070 | Not Available | Negative | 2879540 - 2881117 | 52051.2 |
| abc transporter atp-binding protein | A6122_RS13075 | Not Available | Negative | 2881099 - 2881974 | 30804.1 |
| histidine phosphatase family protein | A6122_RS13080 | Not Available | Positive | 2882115 - 2882810 | 24261.9 |
| duf3090 domain-containing protein | A6122_RS13085 | Not Available | Positive | 2882854 - 2883387 | 18862.4 |
| sco1664 family protein | A6122_RS13090 | Not Available | Positive | 2883384 - 2884148 | 27571.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
