Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS01255 | Not Available | Positive | 286469 - 286966 | 17351.2 |
| peptidoglycan-binding protein | A6122_RS01260 | Not Available | Positive | 286966 - 288063 | 36834.8 |
| abc transporter atp-binding protein | A6122_RS01265 | Not Available | Positive | 288060 - 288749 | 24171.1 |
| abc transporter permease | A6122_RS01270 | Not Available | Positive | 288746 - 289924 | 39677.7 |
| hypothetical protein | A6122_RS01275 | Not Available | Negative | 290082 - 290309 | 7766.35 |
| glycosyltransferase | A6122_RS01280 | Not Available | Positive | 290702 - 291694 | 35291.0 |
| hypothetical protein | A6122_RS01285 | Not Available | Positive | 291858 - 292778 | 32227.0 |
| o-antigen ligase | A6122_RS01290 | Not Available | Positive | 292995 - 294449 | 51216.9 |
| glycosyltransferase | A6122_RS01295 | Not Available | Positive | 294446 - 295483 | 38654.5 |
| lipopolysaccharide biosynthesis protein | A6122_RS01300 | Not Available | Positive | 295480 - 297099 | 57442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
