Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nlpc/p60 family protein | A6122_RS12945 | Not Available | Negative | 2849179 - 2850756 | 53967.6 |
| m23 family metallopeptidase | A6122_RS12950 | Not Available | Negative | 2850749 - 2852116 | 46869.2 |
| Trna-glu | Not Available | Not Available | Positive | 2852358 - 2852430 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2852529 - 2852602 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 2852672 - 2852744 | Not Available |
| type ii caax prenyl endopeptidase rce1 family protein | A6122_RS12970 | Not Available | Positive | 2853222 - 2854184 | 33413.6 |
| gtp pyrophosphokinase family protein | A6122_RS12975 | Not Available | Negative | 2854197 - 2854799 | 22565.9 |
| llm class flavin-dependent oxidoreductase | A6122_RS12980 | Not Available | Positive | 2855030 - 2856367 | 49605.8 |
| hypothetical protein | A6122_RS12985 | Not Available | Positive | 2856408 - 2856590 | 6733.59 |
| mfs transporter | A6122_RS12990 | Not Available | Negative | 2856674 - 2858104 | 48492.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
