Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | A6122_RS12845 | Not Available | Negative | 2828055 - 2828762 | 25471.8 |
| sensor histidine kinase | A6122_RS12850 | Not Available | Negative | 2828759 - 2829892 | 39584.9 |
| hypothetical protein | A6122_RS12855 | Not Available | Positive | 2830295 - 2830498 | 7269.66 |
| type 2 lanthipeptide synthetase lanm | A6122_RS12860 | Not Available | Positive | 2830586 - 2833744 | 111925.0 |
| rossmann-like and duf2520 domain-containing protein | A6122_RS12865 | Not Available | Negative | 2833780 - 2834472 | 22847.5 |
| ph domain-containing protein | A6122_RS12870 | Not Available | Negative | 2834465 - 2836018 | 55644.4 |
| ph domain-containing protein | A6122_RS12875 | Not Available | Negative | 2836015 - 2836551 | 19395.8 |
| duf3180 domain-containing protein | A6122_RS12880 | Not Available | Negative | 2836592 - 2837065 | 16029.2 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | A6122_RS12885 | Not Available | Negative | 2837062 - 2837658 | 21271.3 |
| dihydroneopterin aldolase | A6122_RS12890 | Not Available | Negative | 2837655 - 2838047 | 13894.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
