Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | A6122_RS12670 | Not Available | Negative | 2783081 - 2784286 | 40550.4 |
| lysr family transcriptional regulator | A6122_RS12675 | Not Available | Positive | 2784381 - 2785082 | 24438.5 |
| hypothetical protein | A6122_RS12680 | Not Available | Negative | 2785048 - 2785437 | 15032.8 |
| duf11 domain-containing protein | A6122_RS12685 | Not Available | Negative | 2785505 - 2788312 | 94670.5 |
| Trna-arg | Not Available | Not Available | Positive | 2788747 - 2788819 | Not Available |
| mosc domain-containing protein | A6122_RS12695 | Not Available | Positive | 2789021 - 2789548 | 19034.8 |
| alpha/beta fold hydrolase | A6122_RS12700 | Not Available | Positive | 2789607 - 2790794 | 42806.1 |
| aromatic acid exporter family protein | A6122_RS12705 | Not Available | Negative | 2790805 - 2791845 | 36758.5 |
| hypothetical protein | A6122_RS16695 | Not Available | Positive | 2792037 - 2792195 | 5616.32 |
| Trna-ser | Not Available | Not Available | Positive | 2792381 - 2792470 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
