Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | A6122_RS12610 | Not Available | Positive | 2774244 - 2775332 | 38231.2 |
| manganese catalase family protein | A6122_RS12615 | Not Available | Positive | 2775472 - 2776425 | 34709.0 |
| mur ligase family protein | A6122_RS12620 | Not Available | Positive | 2776490 - 2778022 | 53875.2 |
| aaa family atpase | A6122_RS12625 | Not Available | Positive | 2778015 - 2778734 | 26253.3 |
| mmps family transport accessory protein | A6122_RS12630 | Not Available | Positive | 2779177 - 2779836 | 22153.4 |
| hypothetical protein | A6122_RS12635 | Not Available | Positive | 2780002 - 2780343 | 12532.3 |
| hypothetical protein | A6122_RS12645 | Not Available | Negative | 2780860 - 2781414 | 19109.9 |
| duf3140 domain-containing protein | A6122_RS12650 | Not Available | Positive | 2781621 - 2781962 | 12900.8 |
| (deoxy)nucleoside triphosphate pyrophosphohydrolase | A6122_RS16055 | Not Available | Positive | 2782026 - 2782421 | 14381.2 |
| hypothetical protein | A6122_RS12660 | Not Available | Positive | 2782594 - 2782773 | 5584.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
