Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS12560 | Not Available | Positive | 2764944 - 2765165 | 7947.49 |
| aaa family atpase | A6122_RS16050 | Not Available | Positive | 2765379 - 2765957 | 21274.2 |
| sdr family oxidoreductase | A6122_RS12570 | Not Available | Negative | 2766079 - 2767170 | 39922.8 |
| acyl-coa dehydrogenase family protein | A6122_RS12575 | Not Available | Positive | 2767353 - 2768588 | 43900.4 |
| aldo/keto reductase | A6122_RS12585 | Not Available | Positive | 2769120 - 2770091 | 34516.5 |
| nadh:flavin oxidoreductase/nadh oxidase | A6122_RS12590 | Not Available | Positive | 2770222 - 2771289 | 38256.2 |
| hypothetical protein | A6122_RS17030 | Not Available | Negative | 2771383 - 2771544 | 5417.83 |
| srpbcc family protein | A6122_RS12595 | Not Available | Negative | 2771548 - 2772003 | 17003.7 |
| uracil-xanthine permease family protein | A6122_RS12600 | Not Available | Negative | 2772186 - 2773511 | 44754.7 |
| hypothetical protein | A6122_RS12605 | Not Available | Positive | 2773603 - 2774139 | 19038.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
