Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS12515 | Not Available | Positive | 2758885 - 2759118 | 8111.34 |
| hypothetical protein | A6122_RS12520 | Not Available | Positive | 2759115 - 2759477 | 13219.7 |
| dna-3-methyladenine glycosylase | A6122_RS12525 | Not Available | Negative | 2759567 - 2760421 | 29833.9 |
| zinc-binding dehydrogenase | A6122_RS17380 | Not Available | Negative | 2760418 - 2760702 | 9481.56 |
| glutamate-cysteine ligase family protein | A6122_RS17595 | Not Available | Negative | 2761116 - 2761736 | 21194.7 |
| tetr/acrr family transcriptional regulator | A6122_RS12535 | Not Available | Positive | 2761795 - 2762370 | 20511.2 |
| duf3817 domain-containing protein | A6122_RS12540 | Not Available | Negative | 2762502 - 2762894 | 13445.6 |
| phosphotransferase | A6122_RS12545 | Not Available | Negative | 2762918 - 2763343 | 15172.8 |
| marr family winged helix-turn-helix transcriptional regulator | A6122_RS12550 | Not Available | Positive | 2763484 - 2764068 | 21511.6 |
| hypothetical protein | A6122_RS12555 | Not Available | Positive | 2764273 - 2764614 | 12461.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
