Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase family protein | A6122_RS01205 | Not Available | Positive | 277022 - 278467 | 52389.8 |
| hypothetical protein | A6122_RS01210 | Not Available | Positive | 278778 - 279014 | 9314.05 |
| hypothetical protein | A6122_RS01215 | Not Available | Negative | 279004 - 280182 | 43675.6 |
| dna cytosine methyltransferase | A6122_RS01220 | Not Available | Positive | 280274 - 281494 | 45530.1 |
| hnh endonuclease family protein | A6122_RS01225 | Not Available | Negative | 281537 - 281773 | 8725.48 |
| higa family addiction module antitoxin | A6122_RS17185 | Not Available | Negative | 281929 - 282129 | 7182.56 |
| duf4411 family protein | A6122_RS01230 | Not Available | Negative | 282296 - 282592 | 10765.8 |
| imma/irre family metallo-endopeptidase | A6122_RS01235 | Not Available | Negative | 282553 - 283779 | 44709.8 |
| duf418 domain-containing protein | A6122_RS01240 | Not Available | Negative | 284257 - 285357 | 37573.3 |
| hypothetical protein | A6122_RS01250 | Not Available | Negative | 285850 - 286140 | 9973.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
