Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease signature motif containing protein | A6122_RS12225 | Not Available | Negative | 2695596 - 2696891 | 45945.1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | A6122_RS12230 | Not Available | Negative | 2697045 - 2698742 | 60515.3 |
| pldc n-terminal domain-containing protein | A6122_RS12235 | Not Available | Negative | 2698735 - 2699106 | 13903.8 |
| duf4229 domain-containing protein | A6122_RS12240 | Not Available | Positive | 2699220 - 2699516 | 10905.2 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | A6122_RS12245 | Not Available | Negative | 2699531 - 2700409 | 30788.4 |
| amp-binding protein | A6122_RS12250 | Not Available | Negative | 2700521 - 2701666 | 39254.1 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | A6122_RS12255 | Not Available | Negative | 2701683 - 2702594 | 33577.2 |
| dps family protein | A6122_RS12260 | Not Available | Negative | 2702785 - 2703330 | 20111.5 |
| sdr family nad(p)-dependent oxidoreductase | A6122_RS12265 | Not Available | Negative | 2703452 - 2704252 | 28463.5 |
| glycoside hydrolase family 15 protein | A6122_RS12270 | Not Available | Negative | 2704369 - 2706183 | 65792.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
