Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter subunit a | A6122_RS12135 | Not Available | Positive | 2675238 - 2678294 | 105735.0 |
| na(+)/h(+) antiporter subunit c | A6122_RS12140 | Not Available | Positive | 2678291 - 2678791 | 17923.5 |
| na+/h+ antiporter subunit d | A6122_RS12145 | Not Available | Positive | 2678788 - 2680383 | 55907.6 |
| na+/h+ antiporter subunit e | A6122_RS12150 | Not Available | Positive | 2680380 - 2680952 | 21368.5 |
| monovalent cation/h+ antiporter complex subunit f | A6122_RS12155 | Not Available | Positive | 2680949 - 2681215 | 9417.87 |
| monovalent cation/h(+) antiporter subunit g | A6122_RS12160 | Not Available | Positive | 2681217 - 2681669 | 15598.9 |
| hypothetical protein | A6122_RS16680 | Not Available | Negative | 2681666 - 2681842 | 6089.85 |
| glycoside hydrolase family 13 protein | A6122_RS12165 | Not Available | Positive | 2681912 - 2683639 | 62988.2 |
| m23 family metallopeptidase | A6122_RS12170 | Not Available | Negative | 2683687 - 2684652 | 33147.9 |
| inositol monophosphatase family protein | A6122_RS12175 | Not Available | Negative | 2684902 - 2685714 | 28005.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
