Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | A6122_RS12090 | Not Available | Positive | 2667068 - 2668018 | 33687.6 |
| carbohydrate abc transporter permease | A6122_RS12095 | Not Available | Positive | 2668011 - 2668928 | 32770.6 |
| beta-galactosidase | A6122_RS12100 | Not Available | Negative | 2669012 - 2671114 | 77912.1 |
| glutamate-cysteine ligase family protein | A6122_RS12105 | Not Available | Positive | 2671298 - 2671666 | 12607.3 |
| panacea domain-containing protein | A6122_RS12110 | Not Available | Positive | 2671942 - 2672487 | 20314.8 |
| type ii toxin-antitoxin system death-on-curing family toxin | A6122_RS16030 | Not Available | Positive | 2672484 - 2672888 | 14530.3 |
| Trna-met | Not Available | Not Available | Positive | 2672870 - 2672943 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 2672976 - 2673050 | Not Available |
| aldo/keto reductase | A6122_RS12125 | Not Available | Negative | 2673173 - 2674144 | 33909.7 |
| pd40 domain-containing protein | A6122_RS12130 | Not Available | Negative | 2674217 - 2675107 | 31363.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
