Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-dependent sugar dehydrogenase | A6122_RS01155 | Not Available | Positive | 262689 - 266135 | 120214.0 |
| sugar phosphate isomerase/epimerase | A6122_RS01160 | Not Available | Positive | 266208 - 267197 | 35674.1 |
| hypothetical protein | A6122_RS01165 | Not Available | Positive | 267277 - 268545 | 41116.5 |
| wxl protein peptidoglycan domain-containing protein | A6122_RS01170 | Not Available | Positive | 268687 - 269763 | 36610.3 |
| rok family protein | A6122_RS01175 | Not Available | Negative | 269907 - 271100 | 41103.7 |
| inositol-3-phosphate synthase | A6122_RS01180 | Not Available | Positive | 271382 - 272620 | 42481.3 |
| sco3242 family prenyltransferase | A6122_RS01185 | Not Available | Positive | 272613 - 273488 | 28918.3 |
| eboa domain-containing protein | A6122_RS17180 | Not Available | Positive | 273485 - 274930 | 51045.3 |
| tatd family hydrolase | A6122_RS01195 | Not Available | Positive | 274990 - 275874 | 32554.5 |
| metabolite traffic protein eboe | A6122_RS01200 | Not Available | Positive | 275874 - 277025 | 41457.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
