Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l1 | A6122_RS11995 | Not Available | Negative | 2650457 - 2651149 | 24030.9 |
| 50s ribosomal protein l11 | A6122_RS12000 | Not Available | Negative | 2651329 - 2651757 | 14931.2 |
| transcription termination/antitermination protein nusg | A6122_RS12005 | Not Available | Negative | 2652163 - 2653140 | 35587.9 |
| preprotein translocase subunit sece | A6122_RS12010 | Not Available | Negative | 2653236 - 2653511 | 10036.5 |
| Trna-trp | Not Available | Not Available | Positive | 2653626 - 2653698 | Not Available |
| pyridoxal phosphate-dependent aminotransferase | A6122_RS12020 | Not Available | Positive | 2653888 - 2655120 | 43927.7 |
| abc transporter atp-binding protein | A6122_RS12025 | Not Available | Positive | 2655275 - 2656150 | 31428.4 |
| abc transporter permease | A6122_RS17585 | Not Available | Positive | 2656147 - 2656611 | 16456.3 |
| abc transporter permease | A6122_RS17590 | Not Available | Positive | 2656646 - 2656999 | 12494.4 |
| udp-n-acetylmuramate dehydrogenase | A6122_RS12035 | Not Available | Negative | 2657021 - 2658151 | 38746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
