Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf5997 family protein | A6122_RS11945 | Not Available | Positive | 2641713 - 2642093 | 13985.6 |
| gfo/idh/moca family protein | A6122_RS11950 | Not Available | Negative | 2642163 - 2643272 | 38204.1 |
| gfo/idh/moca family protein | A6122_RS11955 | Not Available | Negative | 2643272 - 2644381 | 38541.7 |
| sugar phosphate isomerase/epimerase | A6122_RS11960 | Not Available | Negative | 2644378 - 2645133 | 26571.3 |
| rok family protein | A6122_RS11965 | Not Available | Positive | 2645278 - 2646429 | 38998.8 |
| yqaj viral recombinase family protein | A6122_RS17020 | Not Available | Positive | 2646530 - 2647162 | 24053.5 |
| alpha/beta fold hydrolase | A6122_RS17025 | Not Available | Positive | 2647159 - 2647914 | 26786.2 |
| duf998 domain-containing protein | A6122_RS11980 | Not Available | Negative | 2647802 - 2648527 | 24442.5 |
| nadp-dependent oxidoreductase | A6122_RS11985 | Not Available | Positive | 2648783 - 2649739 | 33072.3 |
| gnat family n-acetyltransferase | A6122_RS11990 | Not Available | Negative | 2649720 - 2650346 | 22314.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
