Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS11895 | Not Available | Negative | 2631660 - 2632040 | 13144.3 |
| gfo/idh/moca family protein | A6122_RS11900 | Not Available | Positive | 2632134 - 2633156 | 35655.4 |
| cell wall metabolism sensor histidine kinase walk | A6122_RS11905 | Not Available | Negative | 2633440 - 2634984 | 54033.7 |
| response regulator transcription factor | A6122_RS11910 | Not Available | Negative | 2634981 - 2635742 | 28245.0 |
| hypothetical protein | A6122_RS11915 | Not Available | Positive | 2636628 - 2636975 | 12455.7 |
| cpbp family intramembrane glutamic endopeptidase | A6122_RS11920 | Not Available | Positive | 2636972 - 2637970 | 34513.0 |
| apc family permease | A6122_RS11925 | Not Available | Negative | 2637951 - 2639372 | 49776.8 |
| dienelactone hydrolase family protein | A6122_RS11930 | Not Available | Negative | 2639511 - 2640236 | 26335.9 |
| gnat family n-acetyltransferase | A6122_RS11935 | Not Available | Negative | 2640360 - 2640776 | 15755.9 |
| lysr family transcriptional regulator substrate-binding protein | A6122_RS11940 | Not Available | Negative | 2640820 - 2641668 | 30069.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
