Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l deacetylase family protein | A6122_RS11845 | Not Available | Positive | 2622098 - 2622838 | 26946.0 |
| class i sam-dependent methyltransferase | A6122_RS11850 | Not Available | Positive | 2622835 - 2623416 | 21199.3 |
| glycosyltransferase family 2 protein | A6122_RS11855 | Not Available | Positive | 2623413 - 2624126 | 24827.2 |
| hypothetical protein | A6122_RS11860 | Not Available | Positive | 2624263 - 2624496 | 8789.95 |
| glsb/yeaq/ymge family stress response membrane protein | A6122_RS11865 | Not Available | Positive | 2624589 - 2624855 | 8880.52 |
| aldo/keto reductase | A6122_RS11870 | Not Available | Positive | 2625025 - 2625873 | 31384.8 |
| nad(p)-dependent oxidoreductase | A6122_RS11875 | Not Available | Negative | 2625955 - 2626806 | 30844.5 |
| hypothetical protein | A6122_RS11880 | Not Available | Negative | 2626853 - 2627773 | 33359.6 |
| hypothetical protein | A6122_RS11885 | Not Available | Negative | 2627939 - 2628502 | 17841.8 |
| m14 family zinc carboxypeptidase | A6122_RS11890 | Not Available | Negative | 2628584 - 2631547 | 102257.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
