Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class 1b ribonucleoside-diphosphate reductase subunit beta | A6122_RS11695 | Not Available | Negative | 2591532 - 2592512 | 37503.9 |
| class 1b ribonucleoside-diphosphate reductase subunit alpha | A6122_RS11700 | Not Available | Negative | 2592560 - 2594665 | 79230.6 |
| class ib ribonucleoside-diphosphate reductase assembly flavoprotein nrdi | A6122_RS11705 | Not Available | Negative | 2594692 - 2595108 | 14978.8 |
| glutaredoxin-like protein nrdh | A6122_RS11710 | Not Available | Negative | 2595244 - 2595462 | 7941.41 |
| glycerate kinase | A6122_RS11715 | Not Available | Negative | 2595849 - 2596940 | 35483.2 |
| atp-binding cassette domain-containing protein | A6122_RS11720 | Not Available | Negative | 2596968 - 2598875 | 64705.9 |
| hypothetical protein | A6122_RS11725 | Not Available | Negative | 2598879 - 2600096 | 40953.2 |
| hypothetical protein | A6122_RS11730 | Not Available | Negative | 2600077 - 2600976 | 32421.8 |
| peptidase inhibitor family i36 protein | A6122_RS11735 | Not Available | Negative | 2600937 - 2601179 | 8649.14 |
| hypothetical protein | A6122_RS11740 | Not Available | Negative | 2601451 - 2601933 | 16892.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
