Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS17005 | Not Available | Negative | 2580574 - 2581239 | 23444.7 |
| 4'-phosphopantetheinyl transferase superfamily protein | A6122_RS11650 | Not Available | Negative | 2581423 - 2582058 | 22963.7 |
| msmeg_6728 family protein | A6122_RS11655 | Not Available | Positive | 2582142 - 2582588 | 17043.3 |
| transglycosylase domain-containing protein | A6122_RS11660 | Not Available | Positive | 2583018 - 2585534 | 87532.0 |
| hypothetical protein | A6122_RS11665 | Not Available | Negative | 2585628 - 2585873 | 8516.66 |
| atp-dependent clp protease atp-binding subunit | A6122_RS11670 | Not Available | Negative | 2586052 - 2588580 | 91149.9 |
| aldo/keto reductase family oxidoreductase | A6122_RS11675 | Not Available | Negative | 2588792 - 2589724 | 33942.5 |
| gnat family n-acetyltransferase | A6122_RS11680 | Not Available | Positive | 2589966 - 2590556 | 21495.8 |
| xre family transcriptional regulator | A6122_RS11685 | Not Available | Positive | 2590564 - 2591031 | 16651.9 |
| hept-like ribonuclease domain-containing protein | A6122_RS11690 | Not Available | Positive | 2591028 - 2591438 | 14901.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
