Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple monosaccharide abc transporter substrate-binding protein | A6122_RS11600 | Not Available | Positive | 2569793 - 2570875 | 38007.2 |
| multiple monosaccharide abc transporter atp-binding protein | A6122_RS11605 | Not Available | Positive | 2571093 - 2572622 | 55984.5 |
| multiple monosaccharide abc transporter permease | A6122_RS11610 | Not Available | Positive | 2572619 - 2573854 | 42948.7 |
| hypothetical protein | A6122_RS11615 | Not Available | Positive | 2573866 - 2574483 | 21372.7 |
| mfs transporter | A6122_RS15995 | Not Available | Negative | 2574840 - 2576027 | 41141.3 |
| jmjc domain-containing protein | A6122_RS16000 | Not Available | Negative | 2576092 - 2576724 | 22883.4 |
| transposase family protein | A6122_RS11625 | Not Available | Positive | 2576889 - 2577644 | 28640.2 |
| transposase family protein | A6122_RS11630 | Not Available | Positive | 2577993 - 2578748 | 28640.2 |
| hypothetical protein | A6122_RS17000 | Not Available | Positive | 2579117 - 2579314 | 7099.5 |
| hypothetical protein | A6122_RS11640 | Not Available | Negative | 2579909 - 2580361 | 16384.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
