Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS11550 | Not Available | Negative | 2561151 - 2561345 | 6505.06 |
| hypothetical protein | A6122_RS11555 | Not Available | Positive | 2561454 - 2561825 | 12484.9 |
| mosc domain-containing protein | A6122_RS11560 | Not Available | Positive | 2561887 - 2562666 | 28021.7 |
| pdr/vanb family oxidoreductase | A6122_RS11565 | Not Available | Positive | 2562659 - 2563591 | 33288.2 |
| nad(p)/fad-dependent oxidoreductase | A6122_RS11570 | Not Available | Positive | 2563695 - 2564885 | 41405.7 |
| ubia family prenyltransferase | A6122_RS11575 | Not Available | Negative | 2564902 - 2565753 | 28312.5 |
| fic family protein | A6122_RS11580 | Not Available | Negative | 2565790 - 2566983 | 42804.8 |
| nicotinamide riboside transporter pnuc | A6122_RS11585 | Not Available | Positive | 2567242 - 2567907 | 24535.3 |
| helix-turn-helix transcriptional regulator | A6122_RS11590 | Not Available | Positive | 2568080 - 2568361 | 10005.9 |
| laci family dna-binding transcriptional regulator | A6122_RS11595 | Not Available | Positive | 2568537 - 2569580 | 37435.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
