Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | A6122_RS01110 | Not Available | Negative | 248702 - 249451 | 26986.6 |
| triacylglycerol lipase | A6122_RS01115 | Not Available | Negative | 249535 - 250335 | 29088.6 |
| alpha/beta fold hydrolase | A6122_RS01120 | Not Available | Negative | 250332 - 251141 | 29181.7 |
| hypothetical protein | A6122_RS17070 | Not Available | Negative | 251596 - 251748 | 5857.04 |
| transposase family protein | A6122_RS01125 | Not Available | Negative | 251872 - 252627 | 28640.2 |
| duf6531 domain-containing protein | A6122_RS01130 | Not Available | Negative | 252752 - 257461 | 166624.0 |
| hypothetical protein | A6122_RS01135 | Not Available | Negative | 257535 - 258074 | 18287.3 |
| sugar abc transporter atp-binding protein | A6122_RS01140 | Not Available | Positive | 258691 - 260175 | 52483.0 |
| abc transporter permease | A6122_RS01145 | Not Available | Positive | 260310 - 261263 | 32815.1 |
| substrate-binding domain-containing protein | A6122_RS01150 | Not Available | Positive | 261382 - 262461 | 36973.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
