Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS11505 | Not Available | Positive | 2550193 - 2551560 | 48411.1 |
| hypothetical protein | A6122_RS11510 | Not Available | Negative | 2551930 - 2553429 | 52242.0 |
| hypothetical protein | A6122_RS11515 | Not Available | Positive | 2553675 - 2554994 | 44578.7 |
| hypothetical protein | A6122_RS11520 | Not Available | Positive | 2555354 - 2556781 | 48730.2 |
| tetr family transcriptional regulator | A6122_RS16995 | Not Available | Negative | 2556939 - 2557253 | 11474.6 |
| helix-turn-helix domain-containing protein | A6122_RS16670 | Not Available | Negative | 2557432 - 2557677 | 8769.74 |
| hypothetical protein | A6122_RS11535 | Not Available | Positive | 2558553 - 2560019 | 49665.1 |
| duf1992 domain-containing protein | A6122_RS11540 | Not Available | Positive | 2560173 - 2560715 | 20466.1 |
| hypothetical protein | A6122_RS17490 | Not Available | Positive | 2560781 - 2560912 | 4656.66 |
| hypothetical protein | A6122_RS17495 | Not Available | Positive | 2560909 - 2561172 | 9486.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
