Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | A6122_RS11405 | Not Available | Negative | 2524996 - 2526360 | 49417.1 |
| laci family dna-binding transcriptional regulator | A6122_RS11410 | Not Available | Negative | 2526518 - 2527579 | 36941.0 |
| xylose isomerase | A6122_RS11415 | Not Available | Positive | 2527794 - 2528987 | 43394.8 |
| xylulokinase | A6122_RS11420 | Not Available | Positive | 2529131 - 2530516 | 47312.6 |
| tryptophan-rich sensory protein | A6122_RS11425 | Not Available | Positive | 2530629 - 2531429 | 26776.1 |
| abc transporter permease/substrate binding protein | A6122_RS17580 | Not Available | Negative | 2531511 - 2533268 | 61417.4 |
| glycine betaine/l-proline abc transporter atp-binding protein | A6122_RS11435 | Not Available | Negative | 2533265 - 2534623 | 48067.0 |
| hypothetical protein | A6122_RS11440 | Not Available | Positive | 2535188 - 2535634 | 16019.5 |
| pyridoxamine 5'-phosphate oxidase family protein | A6122_RS11445 | Not Available | Positive | 2535639 - 2536094 | 16520.8 |
| hypothetical protein | A6122_RS16660 | Not Available | Negative | 2536278 - 2536775 | 17507.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
