Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | A6122_RS11355 | Not Available | Negative | 2510213 - 2510899 | 23807.1 |
| helicase hera-like domain-containing protein | A6122_RS11360 | Not Available | Negative | 2510969 - 2512789 | 64076.0 |
| saccharopine dehydrogenase family protein | A6122_RS11365 | Not Available | Negative | 2512815 - 2514074 | 45809.2 |
| bifunctional recb family nuclease/dead/deah box helicase | A6122_RS11370 | Not Available | Negative | 2514166 - 2517591 | 123136.0 |
| methylenetetrahydrofolate reductase | A6122_RS11375 | Not Available | Positive | 2517691 - 2518467 | 27653.1 |
| phosphatase pap2 family protein | A6122_RS11380 | Not Available | Negative | 2518528 - 2519310 | 28419.0 |
| rok family transcriptional regulator | A6122_RS11385 | Not Available | Negative | 2519475 - 2520659 | 40895.3 |
| alpha-xylosidase | A6122_RS11390 | Not Available | Negative | 2520730 - 2522940 | 81265.4 |
| carbohydrate abc transporter permease | A6122_RS11395 | Not Available | Negative | 2523009 - 2523926 | 32824.7 |
| carbohydrate abc transporter permease | A6122_RS11400 | Not Available | Negative | 2523926 - 2524873 | 35118.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
