Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Micrococcales
Family
Microbacteriaceae
Genus
Rathayibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Micrococcales |
| Family | Microbacteriaceae |
| Genus | Rathayibacter |
| Species | Rathayibacter tritici |
| Strain | strain NCPPB 1953 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | native Korean plants |
| Biotic relationship | Not Available |
| Host(s) | Triticum aestivum, Hordeum vulgare |
| Cell arrangement | Pairs; Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
514817 bp
Thymine Count
508981 bp
Guanine Count
1156844 bp
Cytosine Count
1174039 bp
Genome Length
3354681 bp
Protein-coding Genes
3111 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A6122_RS16650 | Not Available | Negative | 2499137 - 2500132 | 34819.9 |
| atp-binding cassette domain-containing protein | A6122_RS15970 | Not Available | Negative | 2500213 - 2500818 | 21693.8 |
| hypothetical protein | A6122_RS16655 | Not Available | Negative | 2500815 - 2501855 | 36485.2 |
| hypothetical protein | A6122_RS11335 | Not Available | Negative | 2501861 - 2502460 | 21499.1 |
| transposase family protein | A6122_RS15975 | Not Available | Negative | 2502744 - 2503520 | 28515.2 |
| transposase family protein | A6122_RS15980 | Not Available | Negative | 2503649 - 2504419 | 28638.6 |
| transposase family protein | A6122_RS11340 | Not Available | Positive | 2504634 - 2505404 | 28063.8 |
| is3 family transposase | A6122_RS11345 | Not Available | Positive | 2505508 - 2506691 | 45271.6 |
| is3 family transposase | A6122_RS11350 | Not Available | Negative | 2507561 - 2508744 | 45195.5 |
| transposase family protein | A6122_RS15985 | Not Available | Positive | 2509368 - 2510138 | 28629.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gumming | Causes | PMC4664631 |
| Spike blight | Causes | PMC5538441 |
| Yellow ear rot | Causes | PMC5538441 |
| Yellow slime rot | Causes | PMC5538441 |
| Tundu disease | Causes | PMC5538441 |
| Gumming disease | Causes | PMC5538441 |
| Spike blight of wheat and barley | Causes | PMC5880354 |
